segmentation

Topic Replies Views Activity
Process Motic format slide (*mds) image quickly
Image Analysis
segmentation
7 317 September 26, 2020
Turn 3D binary segmentation masks into instance segmentation masks
Image Analysis
segmentation
5 90 September 24, 2020
DeepMIB - user-friendly tool for training of deep learning network for biological image segmentation
Announcements
matlab ,  segmentation ,  deep-learning ,  mib
23 806 September 22, 2020
How to measure the length,angle,width,interspacing between particles automatically?
Image Analysis
fiji ,  segmentation ,  directionality ,  image-j
1 64 September 18, 2020
Connected components analysis
Image Analysis
fiji ,  imagej ,  plugin ,  segmentation
3 76 September 19, 2020
ROI copying and pasting to target ROI - size/area mismatch?
Usage & Issues
fiji ,  imagej ,  macro ,  segmentation
2 94 September 19, 2020
Tools for Mother Machine data analysis: BACMMAN and DISTNet
Announcements
fiji ,  tracking ,  segmentation ,  bacteria ,  deep-learning ,  mother-machine
0 235 September 19, 2020
Analyze/classify AVI new to this
Image Analysis
segmentation
0 30 September 18, 2020
Seminar by FUJIFILM on 3D Image Analysis on 8th Sep 2020
Announcements
imagej1 ,  fiji ,  cellprofiler ,  imagej ,  macro ,  segmentation
4 244 September 16, 2020
Need help for shape analysis for cells stained with anti beta catenin antibody
Image Analysis
fiji ,  cellprofiler ,  imagej ,  segmentation ,  ilastik
1 71 September 14, 2020
How to analyze and segment reflectance, absorbance, proportion of flowers
Image Analysis
fiji ,  analyze-particles ,  imagej ,  plugin ,  segmentation
0 56 September 13, 2020
Subdividing cell perimeter into multiple ROI
Image Analysis
fiji ,  imagej ,  segmentation ,  roi
6 271 September 10, 2020
Nearest neighbor analysis
Image Analysis
fiji ,  imagej ,  plugin ,  macro ,  segmentation
11 251 September 9, 2020
Adding custom feature for weka segmentation plugin
Usage & Issues
segmentation ,  trainable-weka ,  imagej-fiji
0 34 September 9, 2020
Viewing annotations in weka trainable segmentation
Development
script ,  weka ,  imagej ,  segmentation ,  trainable-weka
13 149 September 8, 2020
Why analyze particle total area is not consistent with color thresholded area in image
Image Analysis
fiji ,  macro ,  segmentation ,  color-threshold
8 160 September 8, 2020
Error Message Using Trainable Weka Segmentation
Usage & Issues
fiji ,  imagej ,  segmentation
0 40 September 6, 2020
How to separate overlapping plants
Image Analysis
fiji ,  imagej ,  plugin ,  segmentation
2 108 September 6, 2020
Making images uniform in size and number of channels
Image Analysis
fiji ,  bio-formats ,  imagej ,  plugin ,  batch-processing ,  segmentation ,  roi ,  ilastik
1 52 September 3, 2020
Objects segmenation in image prepared by SEM
Image Analysis
fiji ,  imagej ,  segmentation
5 166 September 2, 2020
Tissue microenvironments - KMeans unsupervised clustering!
Image Analysis
segmentation ,  qupath
26 941 August 31, 2020
Chest X-Ray Segmentation
Image Analysis
fiji ,  bio-formats ,  imagej ,  dicom ,  segmentation ,  ilastik
15 223 August 30, 2020
I face error when I want to analyze a segmented image with diameterJ
Image Analysis
imagej1 ,  plugin ,  segmentation
2 152 August 28, 2020
Trainable Weka Segmentation, particle size distribution
Image Analysis
analyze-particles ,  segmentation
5 70 August 28, 2020
Software for Whole Slide Image (WSI) Analysis (with API to add Deep Learning models)
Development
omero ,  segmentation ,  roi ,  python ,  qupath ,  cytomine
12 1180 August 27, 2020
FIB-SEM image processing & segmentation
Image Analysis
fiji ,  segmentation ,  ilastik ,  trainable-weka
1 132 August 26, 2020
AMIRA smoothing surface
Image Analysis
segmentation
3 112 August 26, 2020
Help with automatic segmentation and foci counting inside a yeast cells
Development
cellprofiler ,  imagej ,  batch-processing ,  segmentation
1 62 August 26, 2020
How to import image segments created in Imagej into QuPath
Usage & Issues
segmentation ,  image-annotation ,  trainable-weka ,  qupath
2 116 August 26, 2020
What limits image analysts in applying new CNN based tools? (discussion)
Usage & Issues
segmentation ,  python
29 782 August 24, 2020