Topics tagged registration

Topic	Replies	Views	Activity
Development of Python-based 2D section -> 3D atlas registration tool Development registration , python , napari , neuroscience	18	642	September 17, 2020
Planned dev - nonlinear elastix imglib2 transforms (feedback requested) Development imglib2 , registration , elastix	22	332	September 10, 2020
Automatically Crop Registered Image Stack Image Analysis fiji , jython , imagej , registration	1	47	September 1, 2020
Descriptor based registration: How to reuse the 3d-affine model Usage & Issues fiji , plugin , registration , descriptor-based-reg	5	90	August 28, 2020
Best registration tool for 3D electron microscopy images? Image Analysis imagej , registration , python	2	71	August 26, 2020
TrakEM2 Import from Text File Usage & Issues fiji , registration , trakem2	2	51	August 13, 2020
How to apply slice alignment coordinates of one stack to another? Image Analysis fiji , imagej , registration , stack , alignment	13	949	August 5, 2020
Lecture about Bio-Image Analysis Announcements fiji , imagej , registration , macro , segmentation , python	19	871	July 31, 2020
Registering 3D image Sequence - Stabilizing a point of interest Image Analysis imagej , registration , 3d-rois	4	125	July 15, 2020
QuPath- Multiple Image Alignment and Object Transfer Image Analysis registration , qupath , alignment	12	905	July 5, 2020
Locate field of view (cell bodies) in larger image (nuclei) Image Analysis imagej , registration , features , mops , sift , patch-matching	5	119	June 11, 2020
Aligning and combining multiple multichannel fluorescence images to create one hyperpexed image Image Analysis imagej , registration , alignment	17	2468	June 10, 2020
Multi-Template Matching to align slices in stack and issue when used with FIJI 1.53b Usage & Issues fiji , imagej , registration , template-matching , multi-template-match	2	92	June 5, 2020
Optical flow works poorly on simulated data Image Analysis registration , optic-flow , scikit-image	4	158	May 16, 2020
Automating fiducial-based image registration using BigWarp Image Analysis registration , macro , bigwarp , table-conversion	8	195	April 28, 2020
Error attempting alignment of multichannel TIFF (and workaround) Usage & Issues registration , qupath	7	114	April 10, 2020
How to transform points locations (csv) with bigwarp Image Analysis fiji , registration , csv , bigwarp	10	158	March 27, 2020
Interative Rigid Command not working in ImageJ Fiji Image Analysis registration , imagej-fiji	5	94	March 20, 2020
Aligning image stack using MultiStackReg to reference stack Image Analysis imagej , registration , alignment	2	115	March 20, 2020
Manual subpixel registration Image Analysis fiji , imagej , registration	11	396	March 5, 2020
Align frames in .tiff file derived from 2d photon microscopy of rat brain Image Analysis fiji , imagej , registration	7	209	March 4, 2020
Imagej Correct 3D drift memory leak Development fiji , imagej , registration	15	363	March 2, 2020
TrakEM2 tutorial video Announcements fiji , imagej , registration , segmentation , trakem2 , tutorial , alignment	10	979	February 28, 2020
Applying Affine Matrix Result from 2D/3D Registration to Images Image Analysis imagej , affine-transform , registration	11	1359	January 8, 2020
Need help for understanding 'MultiStackReg' transformation file parameters Image Analysis fiji , imagej , plugin , registration , turboreg , stackreg	2	148	December 30, 2019
BigWarp does not load XML / h5 files Usage & Issues fiji , imagej , registration , bigdataviewer , bigwarp	3	125	December 10, 2019
Invert elastix transformation Development registration , elastix	14	1068	November 28, 2019
Affine alignment on just a few slices Image Analysis imagej , affine-transform , registration , sift	1	105	November 8, 2019
Automatically align and rotate images Image Analysis fiji , cellprofiler , imagej , registration	18	1250	November 19, 2019
bunwarpJ: Registration fails using macro call but succeeds if performed manually Usage & Issues fiji , imagej , registration , bunwarpj	2	118	November 13, 2019