In qupath v0.1.x, there’s option to adjust stain vectors, and Reconvolve standard stains which changes the color of the whole slides. I know this is just for visual, but I can vow for it usefulness. For example, for 5 unknown cases, with default color out of the box, I can read 2/5, when changing to new color with Reconvolve standard stains option, I can read the rest 3 much easier.
Slides were scanned with Roche Ventana scanner, Roche uPath software also show the slide colors which are similar to qupath after Reconvolving the colors.
Please bring this option back in new v0.2 version. Or am i missing something?
See here for what I mean by Reconvolve standard stains: