I hope it is appropriate for me to reactivate an old thread, but I have the exact same problem as the original poster. I am using QuPath v0.2.3 to open acquisitions from an Olympus microscope, and I have the same error message with the “missing expected .ets files”. Bioformats in Fiji gives me the same error. The problem is, I do have the .ets files !
These are not my own acquisitions, but the person who sent me them told me they did not change any names or move any files. The file structure I have is like this:
Is there anything obvious I could be missing ? I am new to Olympus microscopes and also to QuPath
Thank you !