Using FIJI plugin in MATLAB?




I have installed MIJI and successfully got it to work with MATLAB 2018b. I would like to be able to run a plugin (‘Landmark - Name Landmarks and Register’ function within MATLAB, but it is not showing up. Is there a way to use this function within MATLAB? Thanks!


Dear @brwalter,
at the moment I haven’t time to test MIJI with that plugin with MATLAB 2018b,
by now I can just suggest you that there is also another way to use Fiji within Matlab and it’s called ImageJ-MATLAB

maybe you can give it a try.

Emanuele Martini


I am able to work with the images between the two programs and use plugins, thanks for suggesting this. I’ll continue to work with this and if I work out a solution I will post back