When I attempt to open my cpout files generated in CellProfiler, I receive the FCS Express 5 Plus error messages:
Column for object count was not found in (file location).cptoc
The table of content could not be parsed in function TCellProfilerParser.Parse
Column for the mask file FileName_Cells was not found in (file location).cptoc
I have been using CellProfiler generated cpout files successfully in FCS Express for some time. The only thing I changed recently was adding a module to my normal pipeline (measure object neighbors). I am working with large images (about 30,000-40,000KB each), but CellProfiler says the image sets were processed successfully each time. Why am I suddenly having an issue with the cptoc files? Can anyone offer any suggestions for how to fix this issue?