Trajectory Analysis

hi,

i’m new to deeplabcut, i managed to use the library to track a mouse and got to the labeled video and plotted trakectories.
i would like to have more data on trajectories, i see plot_trajectory only gives me a bunch of png, is there a way to get like a .csv with the coordinates frame by frame or anyway more data than those png?
i’ve read the docstring functions but it doesn’t seem to be anything for this.

thanks!

If you have the labeled video than it means you have a file created after video analysis (.h5 file if you didn’t select to also create .csv). This is the file that contains x and y coordinates and likelihood for each bodypart in each frame.

1 Like