I’ve been assigned to instruct an exploratory data analysis workshop with R. Since the participants are biologists working with fluorescence microscopy experiments, I want to use a dataset related to their field.
Is there any “toy dataset” available for this? I’m hoping for something like the iris dataset, but for fluorescence microscopy. Nothing too fancy, just something that you would routinely obtain from, say, a CellProfiler pipeline: a table of cells in different time points or wells, containing some morphological and fluorescence intensity measurements. Ideally, the dataset would present a variable which works well for clustering cells in a PCA or t-SNE plot, e.g. control vs treatment, wild-type vs mutant, different cell lines, etc.
Many thanks in advance, cheers!