TAPAS your new companion for batch processing v0.4


TAPAS (Towards an Automated Processing and Analysis System) is an easy to use batch processing system for your every day need. It is based on a list of simple modules that you chain together to create your processing pipeline, no programming or complex linking required, just good old text file.

A new release of TAPAS is available on the TAPAS website. It includes new modules and tutorials for 2D and 3D measurements and quantification.

I also includes some modifications :

  • channels and frames start now at 1
  • module 3dfilters is renamed filters, parameters are radxy and radz, with radz=0 by default.
  • new modules watershedIJ (to separate particles in a binary image) and analyzeParticles.

Feedback and comments welcome.