I’ve been using stardist successfully for a while but there is a problem I can’t figure out:
If I run a plain cell detection and select a cell then I can see a lot of properties about the nucleus, cytoplasm, etc.
However if I start with stardist and select a cell then it doesn’t have the same cell properties, only a few more generic ones.
It seems like the plain cell detection and stardist produce different objects even though
Cells for both.
As a result I can’t view measurements or do further training on objects created by stardist.
Does anyone know how to get around this?