Hello,
Could it be that Stack- and Turbo-reg are not included in Fiji anymore?
I also could not find a corresponding update site.
Hello,
Could it be that Stack- and Turbo-reg are not included in Fiji anymore?
I also could not find a corresponding update site.
These were moved to their own update site due to licensing issues. Please see this announcement:
I warmly recommend to subscribe to the Announcements category on the forum, by choosing the respective option at the top right on that category page
Hello everyone. I’m just transitioning to Fiji from regular ImageJ and I have troubles downloading Turbo-reg. From the thread above I can see that the Stack- and Turbo-reg were moved to a different update site and are not a part of the Fiji. Does that mean that I need to download them separately to Fiji? I have been trying to add Turbo-reg Jar to Fiji but that didn’t help. Is there another plugin in Fiji which is similar to Turbo-reg or how can I upload Turbo-reg?
No, it simply means that you have to activate the respective update site (BIG-EPFL) in your installation.
Thank you very much! I have tried to run the updater but I do not get an option to select update sites. If I go Help > Update the updater just starts running and then it gives an error message
This error might have one of the following causes:
.dmg
) file without first copying Fiji.app
to your local disk, orIt should run fine if you copy Fiji.app e.g. to your Desktop and run it from there.
Thank you very much! It seems to be working now!
I run Stackreg, then show below! what is the matter? how can I use this Stackreg? Thank you very much!
StackReg_ not up-to-date because 1 source files are not up-to-date (C:\Users\ciomp\AppData\Local\Temp\java6031322077514304355\src\main\java\StackReg_.java)
Compiling 1 file in C:\Users\ciomp\AppData\Local\Temp\java6031322077514304355
[-classpath, C:\Users\ciomp\AppData\Local\Temp\java6031322077514304355\target\classes;C:\Users\ciomp\Desktop\Fiji.app\plugins\3D_Blob_Segmentation-
…
No javax.tools.JavaCompiler available. Checking for explicit javac.
No javac.jar found (looked in C:\Users\ciomp\Desktop\Fiji.app\jars)!
java.lang.ClassNotFoundException: com.sun.tools.javac.Main
Hello, I have the same problem wq, did you manage to solve it? Thank you!
Hi!
In case of doubt I would always recommend to
Could you let us know if that helps?