Special characters no longer allowed in script parameter declaration

Hello,

In the script parameter declaration ([https://imagej.net/Script_Parameters]), the label and description options may receive a text string :

#@Double(label = "Enter the length (µm)", description="Unit is µm", value = 1) length

This worked perfectly under Fiji 1.52b. However, after updating up to Fiji 1.52o, the special symbol µ is not displayed correctly. This is a possible bug introduced in the 1.52o version (Report Bug menu in Fiji is not available yet).

Thank you for reading.

I cannot reproduce your issue on an up-to-date Fiji on Mac OSX.

An up-to-date Fiji ships an ImageJ 1.x version at 1.52n currently, and after updating the ImageJ 1.x component to the latest via Help > Update ImageJ…, you get 1.52o. In both cases, I got the µ character displayed correctly:

Could you please post the system details you get from Plugins > Debug > System Information?
Did you save your script as a file, or just used the script editor to run it?

2 Likes

Plugins > Debug > System Information generates this error :

[Wed May 01 15:39:27 EDT 2019] [ERROR] [] Module threw exception
java.lang.NullPointerException
	at org.scijava.util.POM.compareTo(POM.java:190)
	at org.scijava.util.POM.compareTo(POM.java:54)
	at java.util.ComparableTimSort.binarySort(ComparableTimSort.java:262)
	at java.util.ComparableTimSort.sort(ComparableTimSort.java:207)
	at java.util.Arrays.sort(Arrays.java:1312)
	at java.util.Arrays.sort(Arrays.java:1506)
	at java.util.ArrayList.sort(ArrayList.java:1462)
	at java.util.Collections.sort(Collections.java:141)
	at org.scijava.plugins.commands.debug.SystemInformation.run(SystemInformation.java:154)
	at org.scijava.command.CommandModule.run(CommandModule.java:199)
	at org.scijava.module.ModuleRunner.run(ModuleRunner.java:168)
	at org.scijava.module.ModuleRunner.call(ModuleRunner.java:127)
	at org.scijava.module.ModuleRunner.call(ModuleRunner.java:66)
	at org.scijava.thread.DefaultThreadService$3.call(DefaultThreadService.java:238)
	at java.util.concurrent.FutureTask.run(FutureTask.java:266)
	at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
	at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
	at java.lang.Thread.run(Thread.java:748)

Did you save your script as a file, or just used the script editor to run it?

Both with the same result.

I thank you for your help.

My system :

Windows 8.1 Enterprise
Java Version 8 Update 211
Fiji 64bit 1.52o
i7-4790 (3.6 GHz)
16 GB RAM

On another system the story is exactly same:
Windows 7 Professional 64bit SP1
Java Version 8 Update 211
Fiji 64bit 1.52o
i5-4590 (3.3 GHz)
8 GB RAM

Sorry, I still cannot reproduce this, I now tried on Windows 7 as well.

Could you please check that your Fiji is fully updated via Help > Update… (not Update ImageJ…) ?
Also, are there any third-party update sites enabled in your Fiji installation?

I have no third-party update site.
I did Help/Update on the 1.52o version : µ is not displayed correctly
I downloaded again Fiji (1.52n), no update, no more plugin installed : µ is not displayed correctly
I executed again Fiji 1.52b : µ is displayed normally

really strange!

Thank you to try to help.

I pushed a fix for this bug:

I’ll get it released within the next few days.

Of course, this is a separate issue from the µ display issue—which I also cannot reproduce on my macOS 10.14.4 system with ImageJ 2.0.0-rc-69/1.52o + Java 1.8.0_202.

1 Like

Hello Tryphon (and Jan) -

Just to report another platform on which this works:

This works for me on both Fiji 1.52n and 1.52o*. Both the label
and description strings display the “µ” (mu, micron) properly. This
is running a bog-standard Fiji installation on ubuntu 16.04 LTS.

*) I had to run Help > Update ImageJ... to get to 1.52o.
Running Help > Update... leaves me at 1.52n. I’ve noticed
a number of recent posts mentioning 1.52o without further
comment, making me think it might be the “current” version.
Should I be expecting auto-update or Help > Update...
to be updating me to 1.52o, or is 1.52n still the official current
version?

Thanks, mm

Hello,

Thank you for your comments and help. It becomes hard to point the issue origin. My machines are in my workplace. They are controlled by a security network support. Apart this I see nothing that could explain the ‘µ’ display issue.

I will install Fiji at home on my Ubuntu system (I do not have Windows at home). I let you know the result.

The ImageJ update site still ships 1.52n, because we are in the process of transitioning some automation machinery to a different platform. But 1.52o is the most recently released version of ImageJ 1.x.

The special character issue does not rise under Ubuntu 18 + Fiji 1.52o on my personal computer. Mystery remains under machines I use at workplace.

1 Like