Thats my first post here and i started working with Cp today.
I would like to measure the confluency of a cellculture in different time steps. Now, it wasnt a problem to apply my pipeline on my images and it worked great.
I would like to have a percentage of cell coverage ( e.g. 50% confluent), CP does calculate that, but doesnt export it to the spreadsheet in the end, is there any way to include it in the report ?
I do have a good amount of images from each cell culture, is it possible so “show” CP that all images are from one culture and that it should calculate the “overall” confluency ?
I used " identify primaryobjects" which works great. CP shows an image with 3 small pictures (original, cells, cells outline) and a small table with important information. Is it possible to save this exact picture for every analyst image ?
Is there any way to configure CP in a way so that the output folder will always be set inside the source folder ?
- Is it possible to write a .bat executable to open CP, load a Pipeline, alternate the Source/Output paths and start the measurements ?
Sorry for all the questions, but iam quite new to this program and some help would be greatly appreciated.