I’ve been integrating MIJ in Matlab 2019a and have noted a few problems that the developer might like to know.
MIJ.getCurrentImage() doesn’t import a stack into Matlab…
MIJ stops Matlab from saving.
I’m exporting images from Matlab successfully by placing a breakpoint before any saves in the Matlab code. I save off the ImageJ images I need and then close MIJ before continuing in Matlab. I can then open FIJI, or ImageJ and process the saved images, however I make up a stack during the analysis which I save off so I can reopen Matlab and try to import the stack , but that doesn’t work.
What are the tricks for sharing stacks?