Hi QuPath team,
Thanks for inventing such software and your thresholding strategy somewhat unique. I tried different software to segment and find my object of interest, microfluidics droplets. Maybe I am in a wrong room, but, I see that QuPath has the capability to do it (correct me if i am wrong). After trying to do the counting, I got some issue in making the annotation automatically using either the cell detection or positive cell detection feature. The main goal is to detect the whole droplets and then distinguish the one that contain something in the droplets. Is there any workflow that I might be able to explore more? or some other example that might help me to answer my question?
I put a sample image here and look forward to your reply.
Once again, thanks a lot!
Example.tiff (4.0 MB)