Segment the liver vessels

please i need help to segment my image
Q :: Use ImageJ built-in techniques to segment the “liver vessels” much exact as possible


Welcome to the Forum.

The Trainable Weka Segmentation(TWS) plugin is a great tool for segmentation that comes directly with Fiji. You could try to train/apply a classifier to segment your vessels in your images.

NOTE: Fiji is Just ImageJ - it is simply a distribution of ImageJ that comes with a bunch of plugins bundled - ready for you to use out-of-the-box. If you are just getting started, we recommend downloading/using Fiji.

Here are some other helpful links for ImageJ:

Hope this helps!

eta :slight_smile:

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thanks a lot but I’m forced to use imagej


This plugin is definitely worth taking a look at … and you don’t have to worry: ImageJ - Fiji - they are the same! :slight_smile:

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ok i will try it, thanks for help

Assuming you have the entire stack of CT slices, you may be able to use the “Simple Neurite Tracer” plugin, which detects tubular structures, such as blood vessels, from image stacks representing 3D objects.