I would like to save a single object (e.g. cell) into a single image file with the dimensions of the object itself (e.g. 80x80 for a round cell of approx. 80 pixels diameter). Can anyone give me a hint of how to do this? I need this to produce a time-averaged image of a movie of a single moving cell (tracked by the Track Object module).
If it’s not possible, I can try to integrate this (I can program python). Suggestions of how to achieve this are welcome (for example, do you want to have this as a separate module or within the SaveImages module?).
Thanks in advance,