Save imerged image sequences

fiji
imagej
ilastik

#1

Dear all,

I’m trying to save a marged file with Fiji as image sequences.

I have a multichannel movie. After I marged two channels in Fiji, I need to save it as Image Sequences to, later, opend in Ilastik.
The problem is that it saves for each frame two saparate images for the two channels, while I would like to keep them merged. Is it such thing possible?

Thank you for your help!


#2

How about converting the grayscale images to RGB and then saving them?


#3

I do not know about he Fiji side, but you can import stacks into ilastik