I have a series of single channel time laps images (example download, 115 MB) that I import as “Image Sequence” to process them as one stack.
After processing, I wish to save them in exactly the same sequence as they were opened, using the same name.
My simple approach was to use the “Save As > Image Sequence” function again and activate the option “use slice labels as file names”, see code below.
I receive indeed the same number of images with the correct name, and the imageJ status bar also indicates that every slice is written.
The finale images are however corrupt and 0 kb in size.
Here is a simplified imageJ macro to reproduce the issue:
run("Image Sequence...", "open=D:/path/to/source/ file=Air sort"); // potential processing is happening here run("Image Sequence... ", "format=TIFF use save=D:/path/to/target/");
Is “Save As Image Sequence” maybe not intended to split into stacks this way?