We would like to be able to run pipelines that use the module RunImageJ on a cluster. As a first attempt i downloaded the latest source code from github.com/CellProfiler/CellProfiler/ and installed it on my local Linux machine to try it out. CellProfiler 2.0.0 (rev 40aad83) seems to be working, however when I tried to add the RunImageJ module i couldn’t find it in the list. On my Mac, if I list all, it appears between Resize and SaveImages. However on the linux machine it is missing. If I look in the folder CellProfiler/cellprofiler/modules I find the file run_imagej.py and the compiled run_imagej.pyc. So why can’t I find it in the list?