For reference, I have been saving my files as Amira mesh binary RLE compression SLOW (*.am). I have not had the same problems when saving as .model. However, when the .model file is saved as a compressed Amira file (file>save model as) the problem occurs again. (I need to save the file as a compressed Amira file in order to share it.)
My issue started a few days ago when I tried to load a model I had been working on. Instead of loading, the program froze and when I clicked out of the loading window, this error: “Error using reshape To RESHAPE the number of elements must not change” showed up in red.
I opened the model in Amira and manually changed the coordinates and voxel sizes to match the image dataset. I saved the model in Amira and was able to open in MIB and work on it for the rest of the day. However, when I tried to open that file the next day I got the same “reshape” error. I fixed it in the same way (adjusting coordinates and voxel sizes) in Amira, but had the same error again today.
I’ve now been trying to open previous versions of this model saved on my computer and they all have the same error. In later versions of the model, there’s one frame in the z stack that has been deleted and only contains what had been worked on that day (all other labels were missing on that frame).There are two earlier versions of the model are able to open in MIB. However after saving (file>save file as) they no longer work.
I’ve tried downloading earlier versions of the model saved in the cloud. An even more unusual problem occurred. Every version of this model that I download is seemingly ‘converted’ into the first version of the model that started showing the reshape error - when I open these files in Amira they all have the same segmentation and they download as the same size (29,522mb) as the original error file regardless of the size of the file I’m downloading (between 26.2-28.8mb).
I’m at a loss at the moment. I’m not sure if this is an error in saving, an error in downloading, if files are being overwritten or edited in these processes? I don’t know if these are all separate issues that happened at the same time or related issues.
Any help would be appreciated.