I have a 2 channel z-stack of beads that show some shift between them and am looking for the best way to (i) register the two images in 3D and (ii) save and apply this transformation to any other images that suffer from the same pixel shift.
I have tried descriptor based registration, but am not able to find the proper settings. I tested Rigid and Affine with a high number of neighbors and redundancy, but always received:
Not enough candidates 0 - No inliers found Tipp: You could increase the number of neighbors, redundancy or use a model that has more degrees of freedom.
Does somebody have a tip how to make the plugin work, or maybe an alternative solution to the problem?