Hi all, I am new to QuPath and Groovy scripting.
For this reason I am using all the amazing pre-written scripts from Pete and everyone else on here. So thank you.
I am using this script currently:
And it worked brilliantly, I also managed to edit it thanks to a comment from Pete it to export the images full size.
I wanted to add some lines so if there were no annotations it would export the entire bright field image anyway and a matched sized black square for the mask. I got a bit muddled where to add this and what I would need to add.
Sorry I can’t add some example code, if its easier I can give it a go.
Thanks again for any help