Hey QuPath Community,
I am beginning to start the automation process and have some questions that I am hoping could be answered.
In my process I am using the send to image J command then running a macro to threshold, then deselect the regions that contain white space, then sending back the annotation to QuPath. When looking through the documentation I didn’t see any mention of something like this with ImageJ or macros in general.
Is this possible or should I develop a way to work around it? I am a novice coder so any and all input is greatly appreciated.