Qupath 0.2.0 m9 installed but not capable to open files tu put in a project

Hi there, I was so excited about this last version. I hare a bunch of multiplexed images I want to analyze using Qupath. But when I try to load my images into a project I get this long list of errors. Pardon me, my understanding of programming is rudimentary I don’t know what is wrong or how to solve this.

INFO: Refreshing extensions in /Users/perezriverosp/QuPath/extensions
INFO: Added extension: /Users/perezriverosp/QuPath/extensions/bioformats_package.jar
INFO: Added extension: /Users/perezriverosp/QuPath/extensions/qupath-extension-bioformats.jar
INFO: Bio-Formats version 6.3.1
INFO: Loaded extension Bio-Formats server options (Bio-Formats 6.3.1) (10 ms)
INFO: Bio-Formats version 6.3.1
INFO: Loaded extension Bio-Formats server options (Bio-Formats 6.3.1) (2 ms)
INFO: Loaded extension Experimental commands (303 ms)
INFO: Loaded extension ImageJ extension (46 ms)
INFO: Loaded extension JPen extension (18 ms)
INFO: Loaded extension OpenCV extensions (8 ms)
INFO: Loaded extension Rich script editor extension (324 ms)
INFO: OpenSlide version 3.4.1
INFO: Selected style: null
INFO: Performing update check…
WARN: No changelog found - will not check for updates
INFO: Starting QuPath with parameters:
INFO: Project set to Project: AQP5 M1 Qupath proj-project
ERROR: QuPath exception: Receiver class qupath.lib.images.servers.BioFormatsServerBuilder does not define or inherit an implementation of the resolved method ‘abstract java.lang.Class getImageType()’ of interface qupath.lib.images.servers.ImageServerBuilder.
at qupath.lib.images.servers.ImageServerProvider.getInstalledImageServerBuilders(ImageServerProvider.java:120)
at qupath.lib.gui.commands.ProjectImportImagesCommand.promptToImportImages(ProjectImportImagesCommand.java:168)
at qupath.lib.gui.commands.ProjectImportImagesCommand.run(ProjectImportImagesCommand.java:114)
at qupath.lib.gui.QuPathGUI.lambda$createCommandAction$60(QuPathGUI.java:3619)
at org.controlsfx.control.action.Action.handle(Action.java:419)
at org.controlsfx.control.action.Action.handle(Action.java:64)
at com.sun.javafx.event.CompositeEventHandler.dispatchBubblingEvent(CompositeEventHandler.java:86)
at com.sun.javafx.event.EventHandlerManager.dispatchBubblingEvent(EventHandlerManager.java:238)
at com.sun.javafx.event.EventHandlerManager.dispatchBubblingEvent(EventHandlerManager.java:191)
at com.sun.javafx.event.CompositeEventDispatcher.dispatchBubblingEvent(CompositeEventDispatcher.java:59)
at com.sun.javafx.event.BasicEventDispatcher.dispatchEvent(BasicEventDispatcher.java:58)
at com.sun.javafx.event.EventDispatchChainImpl.dispatchEvent(EventDispatchChainImpl.java:114)
at com.sun.javafx.event.BasicEventDispatcher.dispatchEvent(BasicEventDispatcher.java:56)
at com.sun.javafx.event.EventDispatchChainImpl.dispatchEvent(EventDispatchChainImpl.java:114)
at com.sun.javafx.event.BasicEventDispatcher.dispatchEvent(BasicEventDispatcher.java:56)
at com.sun.javafx.event.EventDispatchChainImpl.dispatchEvent(EventDispatchChainImpl.java:114)
at com.sun.javafx.event.BasicEventDispatcher.dispatchEvent(BasicEventDispatcher.java:56)
at com.sun.javafx.event.EventDispatchChainImpl.dispatchEvent(EventDispatchChainImpl.java:114)
at com.sun.javafx.event.BasicEventDispatcher.dispatchEvent(BasicEventDispatcher.java:56)
at com.sun.javafx.event.EventDispatchChainImpl.dispatchEvent(EventDispatchChainImpl.java:114)
at com.sun.javafx.event.BasicEventDispatcher.dispatchEvent(BasicEventDispatcher.java:56)
at com.sun.javafx.event.EventDispatchChainImpl.dispatchEvent(EventDispatchChainImpl.java:114)
at com.sun.javafx.event.EventUtil.fireEventImpl(EventUtil.java:74)
at com.sun.javafx.event.EventUtil.fireEvent(EventUtil.java:49)
at javafx.event.Event.fireEvent(Event.java:198)
at javafx.scene.Node.fireEvent(Node.java:8890)
at javafx.scene.control.Button.fire(Button.java:203)
at com.sun.javafx.scene.control.behavior.ButtonBehavior.mouseReleased(ButtonBehavior.java:206)
at com.sun.javafx.scene.control.inputmap.InputMap.handle(InputMap.java:274)
at com.sun.javafx.event.CompositeEventHandler$NormalEventHandlerRecord.handleBubblingEvent(CompositeEventHandler.java:218)
at com.sun.javafx.event.CompositeEventHandler.dispatchBubblingEvent(CompositeEventHandler.java:80)
at com.sun.javafx.event.EventHandlerManager.dispatchBubblingEvent(EventHandlerManager.java:238)
at com.sun.javafx.event.EventHandlerManager.dispatchBubblingEvent(EventHandlerManager.java:191)
at com.sun.javafx.event.CompositeEventDispatcher.dispatchBubblingEvent(CompositeEventDispatcher.java:59)
at com.sun.javafx.event.BasicEventDispatcher.dispatchEvent(BasicEventDispatcher.java:58)
at com.sun.javafx.event.EventDispatchChainImpl.dispatchEvent(EventDispatchChainImpl.java:114)
at com.sun.javafx.event.BasicEventDispatcher.dispatchEvent(BasicEventDispatcher.java:56)
at com.sun.javafx.event.EventDispatchChainImpl.dispatchEvent(EventDispatchChainImpl.java:114)
at com.sun.javafx.event.BasicEventDispatcher.dispatchEvent(BasicEventDispatcher.java:56)
at com.sun.javafx.event.EventDispatchChainImpl.dispatchEvent(EventDispatchChainImpl.java:114)
at com.sun.javafx.event.BasicEventDispatcher.dispatchEvent(BasicEventDispatcher.java:56)
at com.sun.javafx.event.EventDispatchChainImpl.dispatchEvent(EventDispatchChainImpl.java:114)
at com.sun.javafx.event.BasicEventDispatcher.dispatchEvent(BasicEventDispatcher.java:56)
at com.sun.javafx.event.EventDispatchChainImpl.dispatchEvent(EventDispatchChainImpl.java:114)
at com.sun.javafx.event.BasicEventDispatcher.dispatchEvent(BasicEventDispatcher.java:56)
at com.sun.javafx.event.EventDispatchChainImpl.dispatchEvent(EventDispatchChainImpl.java:114)
at com.sun.javafx.event.EventUtil.fireEventImpl(EventUtil.java:74)
at com.sun.javafx.event.EventUtil.fireEvent(EventUtil.java:54)
at javafx.event.Event.fireEvent(Event.java:198)
at javafx.scene.Scene$MouseHandler.process(Scene.java:3862)
at javafx.scene.Scene.processMouseEvent(Scene.java:1849)
at javafx.scene.Scene$ScenePeerListener.mouseEvent(Scene.java:2590)
at com.sun.javafx.tk.quantum.GlassViewEventHandler$MouseEventNotification.run(GlassViewEventHandler.java:409)
at com.sun.javafx.tk.quantum.GlassViewEventHandler$MouseEventNotification.run(GlassViewEventHandler.java:299)
at java.base/java.security.AccessController.doPrivileged(Unknown Source)
at com.sun.javafx.tk.quantum.GlassViewEventHandler.lambda$handleMouseEvent$2(GlassViewEventHandler.java:447)
at com.sun.javafx.tk.quantum.QuantumToolkit.runWithoutRenderLock(QuantumToolkit.java:412)
at com.sun.javafx.tk.quantum.GlassViewEventHandler.handleMouseEvent(GlassViewEventHandler.java:446)
at com.sun.glass.ui.View.handleMouseEvent(View.java:556)
at com.sun.glass.ui.View.notifyMouse(View.java:942)
at com.sun.glass.ui.mac.MacView.notifyMouse(MacView.java:127)

Hi @paola, it looks like you have the Bio-Formats extension for QuPath v0.1.2 installed, but this isn’t compatible (or required) with QuPath v0.2.0-m9.

You can either delete the extension entirely, or just use Edit → Reset Preferences in v0.2.0-m9 to prevent m9 from finding it (and leave the extension present for v0.1.2, if you keep it installed as well).

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Hi Pete,
Thank you so much!. This worked.
By the way I love Qupath. Is a awesome software, is helping us to connect pathology with research. Thanks again for all the work you and the community put on it. I’ll make sure to cite you when I get data published.

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