Quick question about outputting data to an image

cellprofiler

#1

Hi I’m trying to come up with a simple ratio of nuclei to area for a given piece of tissue. I have the nuclei and area quantification stuff working just fine but am having trouble outputting it to the pic with Displaydataonimage. I found the mention of using “AreaOccupied_Name” in the documentation for MeasureImageAreaOccupied and can now display half of what I need on the image. What I can’t figure out is how to output the total number of nucli counted with identifyprimairyautomatic. What would I use for category and feature number in Displaydataonimage?

Thanks!


#2

Nevermind, figured it out. The Object is “Image” the Category is “ObjectCount” and the Feature is 1. (exported the data to Excel and took a look at the headings to find it.)


#3

Thanks for posting the answer! Much appreciated.