Quantifying fibers

cellprofiler
quantify

#1

Hi,

I tried several sample scripts to quantify neurites but could not efficiently determine fiber length and branching of this eye image, as I do not have a soma.

Can anyone help?


#2

Hi,

For quantifying length of neuritis you need to define a seed point and your skeletonize image. Otherwise you can measure the number of branches and endpoints with Measure Image Skeleton module on the skeletonized image.

Regards
Hamdah