Problem with alignment and smoothing

Hi there,

I am trying to smooth images that have been aligned (cropped to aligned regions).
When I try to smooth the aligned images I continually run into

Traceback (most recent call last):
File “cellprofiler\gui\pipelinecontroller.pyc”, line 932, in do_step
File “cellprofiler\modules\smooth.pyc”, line 150, in run
File “cellprofiler\cpmath\smooth.pyc”, line 58, in smooth_with_function_and_mask
IndexError: index (494) out of range (0<=index<493) in dimension 1

I can get round this but i don’t want empty regions around the image.

Cheers,

James

Hi James,

Could you post your pipeline and an example image which causes this problem?

Thanks!
-Mark