I would like to use the VIB (virtual insect brain) plugin to perform scaling analyses on the brains of different drosophila species, i.e., I ultimately want to compare the relative volumes of distinct neuropils between species.
To get a sense of how this plugin is working, I’ve been trying out to use simple images first (can be found here : https://www.dropbox.com/sh/eqr19ng2zyceav6/AABXuaDVXHdkRNEbT8rjEPWwa?dl=0) .
When I run the VIB protocol plugin, it opens the first dialogue window through which I specify the template and sample stacks as well as the output folder. At that point, the console displays an error message:
‘File C:\Users\ariane\Desktop\AAAoutput\labels\model.labels is not up-to-date, since it does not exist’
It then opens the labeling window. I used it to label 2 parts of the template image. After pressing OK… nothing else happens. The different folders are created in the output folder but they are all empty. The progress window indicates that the sampling was performed on the template image but that’s all.
Anybody has an idea of what I did wrong, and how I could solve this?
Thanks a lot in advance