I am implementing QuPath functions into software for an image capture device as plugins. Currently WatershedCellDetection is working, but I’m trying to pass custom stain vector colors as well, so the user can utilize this feature within our current workflow.
This is my first attempt at creating a plugin using QuPath features (someone else built the cell detection plugin that’s currently being used) and I’d like to add an option prior to running cell detection to easily calibrate the stain color between slides.
The goal is to obtain the custom stain vector results in the same manner (ex. H&E: select ROI > set Hematoxylin, Eosin) to be written to a JSON object for integration into the program.
Does anyone have any experience passing QuPath stain vectors to other software as a plugin?