I’m new to using ImageJ for my work and have been really impressed by it. However, I’m having one small issue.
Whenever I remove outliers, I click okay and they’re gone, great.But, as soon as I try to adjust colour thresholds the outlier removal completely disappears. I want to apply the colour threshold adjustment after the outlier removal.
The only work around I have is to save the image after outlier removal and then start again, but that means that I won’t be able to create a macro for my process.
Essentially, the goal is to measure the area of meat (red). The image needs adjusting as the fine bits of fat within the meat are not an issue, we’re looking for the main red area. Also there is a gloss/sheen to the meat which picks up as bright (as the fat does) hence the need for removing those as outliers. What I want was possible, it just required me to save and reopen.