Opensource alternative to HiTIF computational infrastructure


Looking at this job opportunity,
and wondering as a student, what is closest opensource set up I can have that mimic it?

"The Center for Cancer Research (CCR) at the National Cancer Institute (NCI) invites applications for a Staff Scientist position in the High-Throughput Imaging Facility (HiTIF)/LRBGE. Qualified candidates will have a strong background and extensive experience in high-throughput image processing and analysis, machine learning, and deep learning. In this position, the Image Bioinformatics Scientist will drive the development and implementation of automated image and data processing workflows to analyze large image datasets generated by high-throughput confocal microscopes. These projects will involve researching innovative approaches for segmenting (sub) cellular structures from multi-dimensional optical images using state-of-the art techniques (deep learning algorithms and graph-cuts), multi-modal image registration, feature extraction, unsupervised classification of phenotypic high-content/high-throughput imaging-based screens, and spatio-temporal analysis of single-cell level data. In addition, the successful candidate will be responsible for setting up and managing the HiTIF computational infrastructure. The Image Bioinformatics Scientist will work in a fast-paced research environment, will collaborate on a daily basis with molecular cell biologists. ?