I’m using a groovy script in Imagej to open a .ome.tiff file (saved from qupath). From what I gather Fiji uses the bioformat plugin to read this file. I checked in the plugin config and it is enabled for this format.
However, as the documentation for IJ.openImage states:
I’m running into that issue - the returned ImagePlus object is null. Surely there must be some way to process these files in script?