I am having an issue with the MicrobeJ (MJ) tool I want to use to analyze bacterial cells. MJ has many useful features, one such feature is detection of the nucleoid e.g. when stained with DAPI. This way you can measure some properties e.g. its area. However, it seems that ImageJ of FIJI running with Java 8 somehow bugs this feature? Any has or know a workaround this?
many thanks and cheers,