No data in the excel

cellprofiler

#1

Hello,
I’ve made a CellProfiler analysis and once it’s over the data is exported to an excel.
The problem is that, there are some charts which are empty, not with the nan comment, but empty.

Do you know why is that for and what can I do to get my data from the analysis?

Thank you,
Carlota Miranda


#2

Hi,

Starting from most likely to least likely:

  1. Did you use the “Select measurements to export” option in ExportToSpreadsheet, and not export any measurements for those objects?

  2. Did you use FlagImage with the “Skip if flagged” option turned on in your pipeline somewhere, and were all images flagged?