When loading model, what model file type does Ilastik take? In other words, how can the model (eg, those proved on the Bioimage zoo) be loaded?
cool that you are checking out the NN workflow!
ilastik will load the model from the zip file, as downloaded from bioimage.io. This holds a pytorch model with some additional metadata.
I figured it out. However, since it only loads pretrained model, what is the annotation for? Is it possible to incorporate the NN workflow into the pixel classification algorithm?
Sorry for the late answer. Somehow this slipped my attention.
You are right, right now the annotations don’t do anything. Training is not possible at the moment, but of course we hope that sparse retraining is something ilastik can do at some point. But this is a research question.