I am new to BiofilmQ and have been trying to complete to tutorial as shown on the Drescher lab website after successfully downloading the Matlab supported version. The tutorial folder didn’t have an .nd2 file included like the video on the Drescher lab website so I was wondering if there was a way to still access it for practice. Here is the link I used to access the sample data folder: https://drescherlab.org/data/biofilmQ/docs/usage/installation.html
I’m also having trouble converting my .nd2 files to a series of .tiffs. When I convert them and open them with the BiofilmQ software it only shows one .tif per replicate when I know there should be many. Does anyone have advice for these two issues?
Thank you in advance!