I am uisng the illumination pipeline provided to correct some images I have taken, all of one well at different sites with five wavelengths at each site.
I have dragged my images into the Images input module and added the metadata, which correctly identifies the well, site and wavelength values for each image. However, when I assign names and/or an image matching method I recieve an error message that there is an error in some of my image set and a warning that I have no valid images configured (nothing appears in the “update” check box at the bottom of the screen either). As far as I can see my metadata in the metadata input module matches that I am using to name the channels.
I attach screenshots of each stage I have done so far, any help would be really appreciated!