Hi!

For my bachelorthesis I am investigating how accurate and accessible different nuclei segmentation strategies are. I am not an expert in code by any means although I want to do some kind of metric evaluation. Can anyone help me how I calculate metrics like Precision, Recall, F1 score etc. I attach an example of my ground truth annotations (blue) and a segmentation result from stardist (yellow) in fiji. I am aware of the formulas for these metrics, but I am looking for some way to automate these calculations. Thank you in advance!