I have been trying to load a few relatively large (12-15 GB) IF images in .czi format into the QuPath (v0.2.0-m6). When viewed at low resolution only part of the image is shown. When I zoom in the other parts that appeared black initially can be visualized. I have been trying to export it as a TIFF or other files (Pyramids) and have been unsuccessful. Also, I doubt that this is a memory issue (with 128GB) and persists across platforms (Mac and Linux).
I suspect that the problem is with the file itself. I would highly appreciate if anyone can instruct me of any workaround.
Here what I see at low zoom:
At higher zoom: