For my dissertation I’m doing confocal fluorescence imaging and have lots of TIFF files by now.
The problem: All images I have are made out of 9 tiles stitched to 1 large image (I have both the single tiles and the large image saved). When I try to open the images, ImageJ gives the “java.lang.ArrayIndexOutOfBoundsException: 4096” error. Weirdly, this is only true for around half of my TIFF files, the other half is opened without a problem. All the images were made with the exact same settings, and sometimes there are images that can and cannot be opened that were made in the same session. I don’t think the files are corrupted: I can view them in NIS-Elements Viewer.
Sorry if this is a very basic question. I’m pretty new to this and was also looking in the old questions asked: Many had OutOfBounds exceptions, but none of them had the exception when opening a file.
I would appreciate any help I can get! Thanks