I’m using a pipeline where I have a convert object to images module set up, then a SaveImages module to save the image. I am running a few wells of images.
The resulting saved image for the last well run in the image set appears correctly, but for all other wells the image saved from the convert object to image module does not seem to save the image correctly. I can see in CellProfiler the convert object to image is done correctly, but the resulting saved image has not data, except for the last well in the data set.
How can this be fixed, is this a bug, or known bug?