I have a lot of images of the cell. In each image I have a single cell and wrote a code that can find the boundary of the cell with the environment.
Now I have a big trouble! I have to find these patterns in the cell. I need to write a macro pr use any tool that can help me to automatically explore these patterns in each image and report if each cell has either of these patterns or not. Here are the patterns:
The arrow at top is not important. But to give you intuition, those cells that have any of these patterns are willing to move in the direction of the arrow.
Thanks a lot in advance.
Ps: to give you some idea of what do the cells look like I found some examples online. I cannot share the real images but they look the same. However, they are single color (only green for example) and no nucleus is included.
These cells are moving: