Hi all. I am trying to install Cellprofiler on a CentOS machine (6.9). I would love to be able to install a stable release; but I have not been able to find such a thing. The Linux download links in the web page are disabled. All I have been able to find are instructions for installing from source which are available in the wiki and state:
Install the Java Development Kit (JDK) Install Python Install Cython, matplotlib, NumPy, and SciPy with pip Clone the CellProfiler repository Run pip install -e . from the CellProfiler directory
I have all requirements installed. I have used git to clone the repo (latest, no specific release stated). Running pip install in the directory yields:
[root@tritium CellProfiler]# pip install -e .
DEPRECATION: Python 2.6 is no longer supported by the Python core team, please upgrade your Python. A future version of pip will drop support for Python 2.6
CellProfiler requires Python ‘>=2.7, <3’ but the running Python is 2.6.6
which makes sense as Centos ships with 2.6 AFAIK