I have tracking data generated via TrackMate, and would like to import it into MAMUT for manual editing. Is there a way to do this?
What I have tried so far was to convert the tiff file for TrackMate tracking with BigDataViewer plugin, and then replaced the location of the image data in the TrackMate xml file to it, but it did not work.
Any advice would be greatly appreciated.
It should work. I suggest you generate a MaMuT XML file so that you can see what is the desired format to input the BDV image path into your TrackMate file.
Thank you very much for your answer.
I become able to load the TrackMate xml file into MaMuT by modifying the format.
Along with the format, large file size of the TrackMate xml file (228MB) seemed to cause a trouble in loading data in my case, which I reduced the file size to 9.3 MB by removing invisible spots in TrackMate.
I would like to thank you again for your help.