I am trying to import a multiframe tiff file in ilastik.
You only choose a single file. If your stack is contained in a single file (e.g. a multi-page tiff) please use the “Add File” button.
May I know how to import multipage tiff? I couldn’t locate
From here (https://www.ilastik.org/documentation/basics/batch#:~:text=When%20clicking%20on%20the%20Add,images%20have%20to%20be%20processed.) I see Add file is avaialble in Batch Prediction input selection.
Which option has to be selected from the below?
I was going through the steps described for image segmentation using ilastik in this repository.
The pixel classication tool was trained for at least 30 mins using all 37 default image filters with each of the pre-processed nuclei, blood vessel and micrometastasis images. Once satisfactory performance was seen for the binary segmentation of each of the nuclei, blood vessel and micrometastasis channels this segmentation was batch applied to other images aquired from the same tissue and animal. The output is a labelled segmetnated images of each of the nuclei, blood vessel and micrometastasis channels as multipage tiff files.
And I am trying to import the multiframe tiff to carry out the above workflow.