I am trying to import mosaic images into qupath. Normally, I export .tifs from the imaging software, and Qupath does fine importing the concatenated image. However, I am now working with some fluorescent mosaic images, and I can’t export them as .tifs without the pixel type being set to RGB. So, I thought I would just import the .zvi mosaic into QuPath, which I know for a fact preserves the proper pixel type. However, Qupath automatically splits the mosaic into its composite tiles. I want to preserve the concatenated aspect of the image, as I am trying to create spatial data of various immune markers.
I imagine there is probably an easy solution to this, but I haven’t been able to find anything with my lacking knowledge in computer stuff. Any advice is appreciated!