I’m trying to write a macro to open specific tile series from Leica LIF files in FIJI/ImageJ using the ImageJ macro language.
In the past, I used the ImageJ macro command: run(“Bio-Formats”, “open=filePath view=Hyperstack split_channels series_xx”) to open the series with the number xx from that LIF file.
Unfortunatly, I now have other LIF files where the image stack I want to open is not in a specific position within the file.
Is there any possibility to open a series by its name instead of the series number in a ImageJ macro?
Using the ImageJ macro language would be perfect - but Python and Java solution would also work for me!
Thank you all in advance!
All the best,