Image formatting

cellprofiler

#1

Hi,
I’m completely new to the software! and I can’t see to get my images to work in the program. I’ve tried making the images smaller, using PNG and tif files, making the files 8-bit. Nothing seems to work. This is the error message I’m receiving.
error%20message|690x388
Thank you
Delaney


#2


#3

Hi @DelaneyD, the error is likely taking place in the Metadata or NamesAndTypes modules, and their current configuration isn’t recognizing the images you want to process. I do not think the error is with the format of the input images.

I would recommend looking at the pipelines in the CellProfiler Tutorials. These have good examples of how to configure the Metadata and NamesAndTypes modules that you could use as a template.

I hope this helps!