Ilastik plugin for ImageJ-Fiji manual download HDF5 export error

Hi,

I am using Fiji-ImageJ on an HPC through an interactive environment that lets me use the ImageJ GUI. I was unable to download the Ilastik plugin using the steps available through Imagej.net, the plugin download option was not available for me. I then used the https://sites.imagej.net/Ilastik/plugins/ website to manually download the plugin files into the plugin folder in the command terminal for ilastik. I thought this would work, but after I click okay for the file output and location, I get an exception message stating
…ExecutionException: java.lang.NoSuchMethodError: org.ilastik.ilastik.4ij.hdf5.Hdf5DatasetWriter..

I have also been receiving the “File is not in a supported format, a reader plugin is not available, or it was not found”

I have been using the imagej.net plugin ilastik files available, is there a better more universal ilastik Fiji plugin available for download? I am looking for a ilastik plugin that I can manually download into the plugin files in the terminal

Any information would be greatly appreciated!

Hi @eshunwilson,

not the biggest java expert here, but the plugin jar should contain everything you need for running it. Which version did you try? The update site is currently down, but we have mirrored the latest version here: https://files.ilastik.org/ilastik4ij-1.7.3.jar . Could you try again with this one?
Cheers
Dominik

Hi,

Thank you for the response! The website link I was using to find the .jar files was https://sites.imagej.net/Ilastik/plugins/
Is the update site still down?

for me the update site works again!