I am using Fiji-ImageJ on an HPC through an interactive environment that lets me use the ImageJ GUI. I was unable to download the Ilastik plugin using the steps available through Imagej.net, the plugin download option was not available for me. I then used the https://sites.imagej.net/Ilastik/plugins/ website to manually download the plugin files into the plugin folder in the command terminal for ilastik. I thought this would work, but after I click okay for the file output and location, I get an exception message stating
…ExecutionException: java.lang.NoSuchMethodError: org.ilastik.ilastik.4ij.hdf5.Hdf5DatasetWriter..
I have also been receiving the “File is not in a supported format, a reader plugin is not available, or it was not found”
I have been using the imagej.net plugin ilastik files available, is there a better more universal ilastik Fiji plugin available for download? I am looking for a ilastik plugin that I can manually download into the plugin files in the terminal
Any information would be greatly appreciated!